BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032B12LP1|AL429529
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1134 898 0.0
3x_Contig850 815 0.0
>3x_Contig1134
Length = 4452
Score = 898 bits (453), Expect = 0.0
Identities = 453/453 (100%)
Strand = Plus / Minus
Query: 418 catgattagcttctgtttgcagttctttgaggaagcaccgatatgtctttgtgaacctta 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4452 catgattagcttctgtttgcagttctttgaggaagcaccgatatgtctttgtgaacctta 4393
Query: 478 gacatcaaacctattgcttggcatctcttaatagcctttgttagacgacgctggttctta 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4392 gacatcaaacctattgcttggcatctcttaatagcctttgttagacgacgctggttctta 4333
Query: 538 gccgataaaccagttacatctctgtgtaatattttacccgttgatgtcacaaatcttgac 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4332 gccgataaaccagttacatctctgtgtaatattttacccgttgatgtcacaaatcttgac 4273
Query: 598 aagaactctgggttggtgtataaatcaagtggattgatcttcaatttgttgaatgggtca 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4272 aagaactctgggttggtgtataaatcaagtggattgatcttcaatttgttgaatgggtca 4213
Query: 658 aacgatccaggacgtaccccaaacttcttatctaaatgtattctttctaaggagaaatca 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4212 aacgatccaggacgtaccccaaacttcttatctaaatgtattctttctaaggagaaatca 4153
Query: 718 aatggattgtaaacggagcccggctgaaagtttttgattaacttggattctagcttcttg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4152 aatggattgtaaacggagcccggctgaaagtttttgattaacttggattctagcttcttg 4093
Query: 778 attgtgggcttgctattagcttccgacataccttctttcagaagtttttggtcaagactg 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4092 attgtgggcttgctattagcttccgacataccttctttcagaagtttttggtcaagactg 4033
Query: 838 ttgcagacatatcttgtggtagaaaagaatctt 870
|||||||||||||||||||||||||||||||||
Sbjct: 4032 ttgcagacatatcttgtggtagaaaagaatctt 4000
>3x_Contig850
Length = 2234
Score = 815 bits (411), Expect = 0.0
Identities = 411/411 (100%)
Strand = Plus / Plus
Query: 1 gatcagaatcagagacttcggaggcggtatagatccacaggtagaagaccgagtctttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1821 gatcagaatcagagacttcggaggcggtatagatccacaggtagaagaccgagtctttga 1880
Query: 61 ttattctttttccacaacggtgaaggaagagaaggacagcggtatgagcgattatgtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1881 ttattctttttccacaacggtgaaggaagagaaggacagcggtatgagcgattatgtttt 1940
Query: 121 acctggtcaagaagtccaaaacgttgcaggtatgggattcggacttccaatgtgcaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1941 acctggtcaagaagtccaaaacgttgcaggtatgggattcggacttccaatgtgcaaagc 2000
Query: 181 gtacctagagttgttcaatggtacacttgacattcagtcattgtggggatggggtactga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2001 gtacctagagttgttcaatggtacacttgacattcagtcattgtggggatggggtactga 2060
Query: 241 tgtttatatacgattgcacggtccatcggatagactattcgacaaatgagaacactgtac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2061 tgtttatatacgattgcacggtccatcggatagactattcgacaaatgagaacactgtac 2120
Query: 301 tatcattcagtcccggagctttccattgcaacgtgtttatactgttagcgctatttacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2121 tatcattcagtcccggagctttccattgcaacgtgtttatactgttagcgctatttacag 2180
Query: 361 atataatcctatttattgagaaacatatattcatatatacaagaagttatc 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2181 atataatcctatttattgagaaacatatattcatatatacaagaagttatc 2231
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6310
Number of Sequences: 1807
Number of extensions: 6310
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 2
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)